Difference between revisions of "SJ12138"

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(Created page with "Category:gene == Gene SJ05024 == * transcription-direction: ** negative * right-end-position: ** 61748 * left-end-position: ** 38320 * centisome-position: ** 39.166386...")
(Created page with "Category:gene == Gene SJ12138 == * transcription-direction: ** positive * right-end-position: ** 32791 * left-end-position: ** 13808 * centisome-position: ** 3.8192601...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05024 ==
+
== Gene SJ12138 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 61748
+
** 32791
 
* left-end-position:
 
* left-end-position:
−
** 38320
+
** 13808
 
* centisome-position:
 
* centisome-position:
−
** 39.166386    
+
** 3.8192601    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PHOSGLYPHOS-RXN]]
+
* [[RXN-15561]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7511]]
−
* [[PWY66-399]]
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[GLUCONEO-PWY]]
+
{{#set: right-end-position=32791}}
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
{{#set: left-end-position=13808}}
−
* [[P124-PWY]]
+
{{#set: centisome-position=3.8192601   }}
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
* [[CALVIN-PWY]]
+
{{#set: nb reaction associated=2}}
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
{{#set: nb pathway associated=1}}
−
* [[P185-PWY]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[P122-PWY]]
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7003]]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6886]]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=61748}}
 
−
{{#set: left-end-position=38320}}
 
−
{{#set: centisome-position=39.166386   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=1}}
 
−
{{#set: nb pathway associated=14}}
 

Revision as of 14:48, 5 January 2021

Gene SJ12138

  • transcription-direction:
    • positive
  • right-end-position:
    • 32791
  • left-end-position:
    • 13808
  • centisome-position:
    • 3.8192601

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12138&oldid=55757"