Difference between revisions of "SJ12139"

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(Created page with "Category:gene == Gene SJ13061 == * transcription-direction: ** positive * right-end-position: ** 329121 * left-end-position: ** 312350 * centisome-position: ** 90.12843...")
(Created page with "Category:gene == Gene SJ12139 == * transcription-direction: ** negative * right-end-position: ** 322676 * left-end-position: ** 313944 * centisome-position: ** 86.83617...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13061 ==
+
== Gene SJ12139 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 329121
+
** 322676
 
* left-end-position:
 
* left-end-position:
−
** 312350
+
** 313944
 
* centisome-position:
 
* centisome-position:
−
** 90.12843    
+
** 86.83617    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEROXID-RXN]]
+
* [[ACETOACETATE--COA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14240]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=negative}}
−
* [[RXN-15288]]
+
{{#set: right-end-position=322676}}
−
** Category: [[annotation]]
+
{{#set: left-end-position=313944}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=86.83617   }}
−
* [[RXN-17352]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** Category: [[annotation]]
+
{{#set: nb reaction associated=1}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8635]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PWY-7214]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7445]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5466]]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6824]]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5469]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5461]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=329121}}
 
−
{{#set: left-end-position=312350}}
 
−
{{#set: centisome-position=90.12843   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=5}}
 
−
{{#set: nb pathway associated=6}}
 

Latest revision as of 11:08, 18 March 2021

Gene SJ12139

  • transcription-direction:
    • negative
  • right-end-position:
    • 322676
  • left-end-position:
    • 313944
  • centisome-position:
    • 86.83617

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12139&oldid=135378"