Difference between revisions of "SJ12139"

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(Created page with "Category:gene == Gene SJ03464 == * transcription-direction: ** positive * right-end-position: ** 104791 * left-end-position: ** 103898 * centisome-position: ** 86.20452...")
(Created page with "Category:gene == Gene SJ12139 == * transcription-direction: ** negative * right-end-position: ** 322676 * left-end-position: ** 313944 * centisome-position: ** 86.83617...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03464 ==
+
== Gene SJ12139 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 104791
+
** 322676
 
* left-end-position:
 
* left-end-position:
−
** 103898
+
** 313944
 
* centisome-position:
 
* centisome-position:
−
** 86.20452    
+
** 86.83617    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4OH2OXOGLUTARALDOL-RXN]]
+
* [[ACETOACETATE--COA-LIGASE-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DEHYDDEOXPHOSGALACT-ALDOL-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[KDPGALDOL-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13990]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
== Pathway(s) associated ==
+
{{#set: transcription-direction=negative}}
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: right-end-position=322676}}
−
* [[HYDROXYPRODEG-PWY]]
+
{{#set: left-end-position=313944}}
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=86.83617   }}
−
* [[PWY-7130]]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[GALACTCAT-PWY]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7310]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-2221]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[ENTNER-DOUDOROFF-PWY]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7562]]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7242]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[GALACTUROCAT-PWY]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6507]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=104791}}
 
−
{{#set: left-end-position=103898}}
 
−
{{#set: centisome-position=86.20452   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=10}}
 

Latest revision as of 11:08, 18 March 2021

Gene SJ12139

  • transcription-direction:
    • negative
  • right-end-position:
    • 322676
  • left-end-position:
    • 313944
  • centisome-position:
    • 86.83617

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12139&oldid=135378"