Difference between revisions of "SJ12139"

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(Created page with "Category:gene == Gene SJ03464 == * transcription-direction: ** positive * right-end-position: ** 104791 * left-end-position: ** 103898 * centisome-position: ** 86.20452...")
(Created page with "Category:gene == Gene SJ13061 == * transcription-direction: ** positive * right-end-position: ** 329121 * left-end-position: ** 312350 * centisome-position: ** 90.12843...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03464 ==
+
== Gene SJ13061 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 104791
+
** 329121
 
* left-end-position:
 
* left-end-position:
−
** 103898
+
** 312350
 
* centisome-position:
 
* centisome-position:
−
** 86.20452    
+
** 90.12843    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4OH2OXOGLUTARALDOL-RXN]]
+
* [[PEROXID-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DEHYDDEOXPHOSGALACT-ALDOL-RXN]]
+
* [[RXN-14240]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[KDPGALDOL-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13990]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7214]]
−
* [[HYDROXYPRODEG-PWY]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7445]]
−
* [[PWY-7130]]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[GALACTCAT-PWY]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7310]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-2221]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[ENTNER-DOUDOROFF-PWY]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7562]]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7242]]
 
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[GALACTUROCAT-PWY]]
+
* [[PWY-5466]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6507]]
+
* [[PWY-6824]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
</div>
+
* [[PWY-5469]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5461]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=104791}}
+
{{#set: right-end-position=329121}}
−
{{#set: left-end-position=103898}}
+
{{#set: left-end-position=312350}}
−
{{#set: centisome-position=86.20452   }}
+
{{#set: centisome-position=90.12843   }}
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=6}}

Revision as of 20:26, 18 December 2020

Gene SJ13061

  • transcription-direction:
    • positive
  • right-end-position:
    • 329121
  • left-end-position:
    • 312350
  • centisome-position:
    • 90.12843

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12139&oldid=44194"