Difference between revisions of "SJ12139"

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(Created page with "Category:gene == Gene SJ19798 == * transcription-direction: ** positive * right-end-position: ** 60924 * left-end-position: ** 53572 * centisome-position: ** 24.351795...")
(Created page with "Category:gene == Gene SJ03464 == * transcription-direction: ** positive * right-end-position: ** 104791 * left-end-position: ** 103898 * centisome-position: ** 86.20452...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19798 ==
+
== Gene SJ03464 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 60924
+
** 104791
 
* left-end-position:
 
* left-end-position:
−
** 53572
+
** 103898
 
* centisome-position:
 
* centisome-position:
−
** 24.351795    
+
** 86.20452    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[4OH2OXOGLUTARALDOL-RXN]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[DEHYDDEOXPHOSGALACT-ALDOL-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[KDPGALDOL-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-13990]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
* [[HYDROXYPRODEG-PWY]]
−
* [[PWY-7198]]
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-7130]]
−
* [[PWY-7184]]
+
** '''1''' reactions found over '''7''' reactions in the full pathway
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
* [[GALACTCAT-PWY]]
−
* [[PWY-6545]]
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7310]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-2221]]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[ENTNER-DOUDOROFF-PWY]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7562]]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7242]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[GALACTUROCAT-PWY]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6507]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=60924}}
+
{{#set: right-end-position=104791}}
−
{{#set: left-end-position=53572}}
+
{{#set: left-end-position=103898}}
−
{{#set: centisome-position=24.351795   }}
+
{{#set: centisome-position=86.20452   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=10}}

Revision as of 09:26, 27 August 2019

Gene SJ03464

  • transcription-direction:
    • positive
  • right-end-position:
    • 104791
  • left-end-position:
    • 103898
  • centisome-position:
    • 86.20452

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • HYDROXYPRODEG-PWY
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7130
    • 1 reactions found over 7 reactions in the full pathway
  • GALACTCAT-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7310
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-2221
    • 6 reactions found over 9 reactions in the full pathway
  • ENTNER-DOUDOROFF-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7562
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7242
    • 1 reactions found over 4 reactions in the full pathway
  • GALACTUROCAT-PWY
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6507
    • 1 reactions found over 5 reactions in the full pathway




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