Difference between revisions of "SJ12148"

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(Created page with "Category:gene == Gene SJ03995 == * transcription-direction: ** positive * right-end-position: ** 197850 * left-end-position: ** 178390 * centisome-position: ** 34.40402...")
 
(Created page with "Category:gene == Gene SJ12148 == * transcription-direction: ** positive * right-end-position: ** 113423 * left-end-position: ** 106581 * centisome-position: ** 29.480053...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03995 ==
+
== Gene SJ12148 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 197850
+
** 113423
 
* left-end-position:
 
* left-end-position:
−
** 178390
+
** 106581
 
* centisome-position:
 
* centisome-position:
−
** 34.40402    
+
** 29.480053    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[CDPDIGLYSYN-RXN]]
−
* [[3.6.3.4-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[ATPASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[DIACYLGLYKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[RXN-12959]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[RXN-15091]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14455]]
+
* [[RXN0-5515]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-5462]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-5981]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY0-1319]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-5667]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-7817]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-7039]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[TRIGLSYN-PWY]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7420]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=197850}}
+
{{#set: right-end-position=113423}}
−
{{#set: left-end-position=178390}}
+
{{#set: left-end-position=106581}}
−
{{#set: centisome-position=34.40402   }}
+
{{#set: centisome-position=29.480053   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:04, 18 March 2021

Gene SJ12148

  • transcription-direction:
    • positive
  • right-end-position:
    • 113423
  • left-end-position:
    • 106581
  • centisome-position:
    • 29.480053

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5981
    • 3 reactions found over 5 reactions in the full pathway
  • PWY0-1319
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5667
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7817
    • 6 reactions found over 16 reactions in the full pathway
  • PWY-7039
    • 4 reactions found over 5 reactions in the full pathway
  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7420
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12148&oldid=133513"