Difference between revisions of "SJ12148"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP-D-GLUCOSE GDP-D-GLUCOSE] == * common-name: ** gdp-α-d-glucose * smiles: ** c(o)c1(c(o...")
(Created page with "Category:gene == Gene SJ12148 == * transcription-direction: ** positive * right-end-position: ** 113423 * left-end-position: ** 106581 * centisome-position: ** 29.480053...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP-D-GLUCOSE GDP-D-GLUCOSE] ==
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== Gene SJ12148 ==
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* common-name:
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* transcription-direction:
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** gdp-α-d-glucose
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** positive
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* smiles:
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* right-end-position:
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** c(o)c1(c(o)c(o)c(o)c(o1)op([o-])(=o)op([o-])(=o)occ2(oc(c(o)c(o)2)n4(c=nc3(c(=o)nc(n)=nc=34))))
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** 113423
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* inchi-key:
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* left-end-position:
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** mvmscbbuihutgj-lrjdveewsa-l
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** 106581
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* molecular-weight:
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* centisome-position:
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** 603.329
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** 29.480053   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-12486]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-12486]]
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* [[CDPDIGLYSYN-RXN]]
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* [[RXN4FS-13]]
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** Category: [[orthology]]
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== Reaction(s) of unknown directionality ==
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: common-name=gdp-α-d-glucose}}
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* [[DIACYLGLYKIN-RXN]]
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{{#set: inchi-key=inchikey=mvmscbbuihutgj-lrjdveewsa-l}}
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** Category: [[annotation]]
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{{#set: molecular-weight=603.329}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12959]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15091]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5515]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-5981]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY0-1319]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5667]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7817]]
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** '''6''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-7039]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[TRIGLSYN-PWY]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7420]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=113423}}
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{{#set: left-end-position=106581}}
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{{#set: centisome-position=29.480053    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=7}}

Latest revision as of 11:04, 18 March 2021

Gene SJ12148

  • transcription-direction:
    • positive
  • right-end-position:
    • 113423
  • left-end-position:
    • 106581
  • centisome-position:
    • 29.480053

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5981
    • 3 reactions found over 5 reactions in the full pathway
  • PWY0-1319
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5667
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7817
    • 6 reactions found over 16 reactions in the full pathway
  • PWY-7039
    • 4 reactions found over 5 reactions in the full pathway
  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7420
    • 4 reactions found over 4 reactions in the full pathway




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