Difference between revisions of "SJ12185"

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(Created page with "Category:gene == Gene SJ04752 == * transcription-direction: ** negative * right-end-position: ** 60699 * left-end-position: ** 52237 * centisome-position: ** 51.44627...")
(Created page with "Category:gene == Gene SJ11915 == * transcription-direction: ** positive * right-end-position: ** 425779 * left-end-position: ** 419860 * centisome-position: ** 54.293667...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04752 ==
+
== Gene SJ11915 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 60699
+
** 425779
 
* left-end-position:
 
* left-end-position:
−
** 52237
+
** 419860
 
* centisome-position:
 
* centisome-position:
−
** 51.44627    
+
** 54.293667    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-5466]]
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ACID-PHOSPHATASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN-5467]]
−
* [[NUCLEOTIDASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN-5468]]
−
* [[RXN-14473]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN-5469]]
−
* [[RXN-17947]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17948]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-5822]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7241]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[SUGAR-PHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6348]]
+
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''16''' reactions found over '''19''' reactions in the full pathway
−
* [[NADPHOS-DEPHOS-PWY]]
+
{{#set: transcription-direction=positive}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=425779}}
−
* [[PWY-5083]]
+
{{#set: left-end-position=419860}}
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
{{#set: centisome-position=54.293667   }}
−
* [[NAD-BIOSYNTHESIS-II]]
 
−
** '''4''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-4702]]
 
−
** '''3''' reactions found over '''14''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=60699}}
 
−
{{#set: left-end-position=52237}}
 
−
{{#set: centisome-position=51.44627   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}

Revision as of 08:22, 15 March 2021

Gene SJ11915

  • transcription-direction:
    • positive
  • right-end-position:
    • 425779
  • left-end-position:
    • 419860
  • centisome-position:
    • 54.293667

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12185&oldid=122825"