Difference between revisions of "SJ12185"
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(Created page with "Category:gene == Gene SJ12489 == * transcription-direction: ** negative * right-end-position: ** 516376 * left-end-position: ** 504083 * centisome-position: ** 67.2577...") |
(Created page with "Category:gene == Gene SJ19144 == * transcription-direction: ** positive * right-end-position: ** 85373 * left-end-position: ** 75227 * centisome-position: ** 11.757654...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ19144 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 85373 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 75227 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 11.757654 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[QUINOPRIBOTRANS-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
| − | {{#set: right-end-position= | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: left-end-position= | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: centisome-position= | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-5653]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PYRIDNUCSYN-PWY]] | ||
| + | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-7342]] | ||
| + | ** '''4''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-5316]] | ||
| + | ** '''3''' reactions found over '''9''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=85373}} | ||
| + | {{#set: left-end-position=75227}} | ||
| + | {{#set: centisome-position=11.757654 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
| + | {{#set: nb pathway associated=4}} | ||
Revision as of 09:26, 27 August 2019
Contents
Gene SJ19144
- transcription-direction:
- positive
- right-end-position:
- 85373
- left-end-position:
- 75227
- centisome-position:
- 11.757654
Organism(s) associated with this gene
Reaction(s) associated
- QUINOPRIBOTRANS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5653
- 3 reactions found over 4 reactions in the full pathway
- PYRIDNUCSYN-PWY
- 6 reactions found over 6 reactions in the full pathway
- PWY-7342
- 4 reactions found over 9 reactions in the full pathway
- PWY-5316
- 3 reactions found over 9 reactions in the full pathway
