Difference between revisions of "SJ12193"

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(Created page with "Category:gene == Gene SJ11954 == * transcription-direction: ** positive * right-end-position: ** 266841 * left-end-position: ** 261391 * centisome-position: ** 72.0842...")
 
(Created page with "Category:gene == Gene SJ12193 == * transcription-direction: ** negative * right-end-position: ** 16854 * left-end-position: ** 1071 * centisome-position: ** 6.174334 =...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ11954 ==
+
== Gene SJ12193 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 266841
+
** 16854
 
* left-end-position:
 
* left-end-position:
** 261391
+
** 1071
 
* centisome-position:
 
* centisome-position:
** 72.0842    
+
** 6.174334    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[DIHYDROFOLATEREDUCT-RXN]]
+
* [[1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN]]
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[METHENYLTHFCYCLOHYDRO-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6352]]
* [[1CMET2-PWY]]
+
** '''5''' reactions found over '''8''' reactions in the full pathway
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
* [[PWY-3841]]
+
{{#set: right-end-position=16854}}
** '''9''' reactions found over '''11''' reactions in the full pathway
+
{{#set: left-end-position=1071}}
* [[PWY-6614]]
+
{{#set: centisome-position=6.174334   }}
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5497]]
 
** '''10''' reactions found over '''24''' reactions in the full pathway
 
* [[P164-PWY]]
 
** '''6''' reactions found over '''17''' reactions in the full pathway
 
* [[CODH-PWY]]
 
** '''4''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-5030]]
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-7909]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-2201]]
 
** '''9''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-6613]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-1722]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=266841}}
 
{{#set: left-end-position=261391}}
 
{{#set: centisome-position=72.0842   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:08, 18 March 2021

Gene SJ12193

  • transcription-direction:
    • negative
  • right-end-position:
    • 16854
  • left-end-position:
    • 1071
  • centisome-position:
    • 6.174334

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6352
    • 5 reactions found over 8 reactions in the full pathway