Difference between revisions of "SJ12193"

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(Created page with "Category:gene == Gene SJ11954 == * transcription-direction: ** positive * right-end-position: ** 266841 * left-end-position: ** 261391 * centisome-position: ** 72.0842...")
 
(Created page with "Category:gene == Gene SJ07177 == * transcription-direction: ** negative * right-end-position: ** 316674 * left-end-position: ** 311069 * centisome-position: ** 21.290405...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11954 ==
+
== Gene SJ07177 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 266841
+
** 316674
 
* left-end-position:
 
* left-end-position:
−
** 261391
+
** 311069
 
* centisome-position:
 
* centisome-position:
−
** 72.0842    
+
** 21.290405    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DIHYDROFOLATEREDUCT-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[METHENYLTHFCYCLOHYDRO-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[SUGAR-PHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=negative}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=316674}}
−
== Pathway(s) associated ==
+
{{#set: left-end-position=311069}}
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: centisome-position=21.290405   }}
−
* [[1CMET2-PWY]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-3841]]
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6614]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5497]]
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
* [[P164-PWY]]
 
−
** '''6''' reactions found over '''17''' reactions in the full pathway
 
−
* [[CODH-PWY]]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5030]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7909]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-2201]]
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6613]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-1722]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=266841}}
 
−
{{#set: left-end-position=261391}}
 
−
{{#set: centisome-position=72.0842   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=11}}
 

Revision as of 14:22, 26 August 2019

Gene SJ07177

  • transcription-direction:
    • negative
  • right-end-position:
    • 316674
  • left-end-position:
    • 311069
  • centisome-position:
    • 21.290405

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12193&oldid=18274"