Difference between revisions of "SJ12204"

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(Created page with "Category:gene == Gene SJ12204 == * transcription-direction: ** negative * right-end-position: ** 37430 * left-end-position: ** 26433 * centisome-position: ** 3.4557548...")
(Created page with "Category:gene == Gene SJ16767 == * transcription-direction: ** positive * right-end-position: ** 32270 * left-end-position: ** 30675 * centisome-position: ** 4.497517...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12204 ==
+
== Gene SJ16767 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 37430
+
** 32270
 
* left-end-position:
 
* left-end-position:
−
** 26433
+
** 30675
 
* centisome-position:
 
* centisome-position:
−
** 3.4557548    
+
** 4.497517    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[TRANSALDOL-RXN]]
+
* [[3.1.26.4-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
== Pathway(s) associated ==
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PWY-1861]]
+
{{#set: transcription-direction=positive}}
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=32270}}
−
* [[P124-PWY]]
+
{{#set: left-end-position=30675}}
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
{{#set: centisome-position=4.497517   }}
−
* [[P185-PWY]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[NONOXIPENT-PWY]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5723]]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=37430}}
 
−
{{#set: left-end-position=26433}}
 
−
{{#set: centisome-position=3.4557548   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=5}}
 

Revision as of 11:05, 15 January 2021

Gene SJ16767

  • transcription-direction:
    • positive
  • right-end-position:
    • 32270
  • left-end-position:
    • 30675
  • centisome-position:
    • 4.497517

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12204&oldid=107159"