Difference between revisions of "SJ12212"

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(Created page with "Category:gene == Gene SJ21333 == * transcription-direction: ** positive * right-end-position: ** 106997 * left-end-position: ** 85829 * centisome-position: ** 14.293565...")
(Created page with "Category:gene == Gene SJ01231 == * transcription-direction: ** negative * right-end-position: ** 212321 * left-end-position: ** 190540 * centisome-position: ** 34.431538...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ21333 ==
+
== Gene SJ01231 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 106997
+
** 212321
 
* left-end-position:
 
* left-end-position:
** 85829
+
** 190540
 
* centisome-position:
 
* centisome-position:
** 14.293565    
+
** 34.431538    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[NADH-DEHYDROG-A-RXN]]
+
* [[5.3.1.23-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[NADH-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5330]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7174]]
* [[PWY0-1335]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-4361]]
* [[PWY-4302]]
+
** '''3''' reactions found over '''7''' reactions in the full pathway
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
* [[PWY-3781]]
+
{{#set: right-end-position=212321}}
** '''4''' reactions found over '''4''' reactions in the full pathway
+
{{#set: left-end-position=190540}}
* [[PWY0-1334]]
+
{{#set: centisome-position=34.431538   }}
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6692]]
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-5083]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-7279]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY0-1573]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-7269]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY0-1568]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY0-1567]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=106997}}
 
{{#set: left-end-position=85829}}
 
{{#set: centisome-position=14.293565   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=2}}

Revision as of 09:25, 27 August 2019

Gene SJ01231

  • transcription-direction:
    • negative
  • right-end-position:
    • 212321
  • left-end-position:
    • 190540
  • centisome-position:
    • 34.431538

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7174
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-4361
    • 3 reactions found over 7 reactions in the full pathway