Difference between revisions of "SJ12213"

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(Created page with "Category:gene == Gene SJ20894 == * transcription-direction: ** positive * right-end-position: ** 469219 * left-end-position: ** 463957 * centisome-position: ** 75.99648...")
(Created page with "Category:gene == Gene SJ12213 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == <div class="toccolours mw-co...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20894 ==
+
== Gene SJ12213 ==
−
* transcription-direction:
 
−
** positive
 
−
* right-end-position:
 
−
** 469219
 
−
* left-end-position:
 
−
** 463957
 
−
* centisome-position:
 
−
** 75.99648   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[3.1.1.64-RXN]]
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* [[DIHYDROKAEMPFEROL-4-REDUCTASE-RXN]]
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** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[3.1.1.73-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[CARBOXYLESTERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10711]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10767]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12086]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12252]]
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* [[RXN-1101]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12575]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12579]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXNQT-4366]]
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* [[RXN-1106]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
+
* [[RXN-1124]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-600]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7784]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9725]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6784]]
+
* [[PWY1F-823]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6303]]
+
* [[PWY-361]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''7''' reactions found over '''15''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[PWY-6027]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[LIPAS-PWY]]
+
* [[PWY-5152]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-6035]]
−
{{#set: right-end-position=469219}}
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
{{#set: left-end-position=463957}}
 
−
{{#set: centisome-position=75.99648    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=12}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:09, 18 March 2021

Gene SJ12213

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY1F-823
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-361
    • 7 reactions found over 15 reactions in the full pathway
  • PWY-6027
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5152
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6035
    • 1 reactions found over 3 reactions in the full pathway


Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12213&oldid=135749"