Difference between revisions of "SJ12221"
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(Created page with "Category:gene == Gene SJ05179 == * transcription-direction: ** positive * right-end-position: ** 43397 * left-end-position: ** 36857 * centisome-position: ** 38.478886...") |
(Created page with "Category:gene == Gene SJ12221 == * transcription-direction: ** negative * right-end-position: ** 72190 * left-end-position: ** 63149 * centisome-position: ** 8.255872...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ12221 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 72190 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 63149 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 8.255872 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[XYLULOKIN-RXN]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY | + | * [[DARABITOLUTIL-PWY]] |
| − | ** ''' | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
| − | * [[PWY | + | * [[LARABITOLUTIL-PWY]] |
| − | ** ''' | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
| − | * [[ | + | * [[XYLCAT-PWY]] |
| − | + | ** '''1''' reactions found over '''2''' reactions in the full pathway | |
| − | + | {{#set: transcription-direction=negative}} | |
| − | ** ''' | + | {{#set: right-end-position=72190}} |
| − | {{#set: transcription-direction= | + | {{#set: left-end-position=63149}} |
| − | {{#set: right-end-position= | + | {{#set: centisome-position=8.255872 }} |
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Latest revision as of 11:06, 18 March 2021
Contents
Gene SJ12221
- transcription-direction:
- negative
- right-end-position:
- 72190
- left-end-position:
- 63149
- centisome-position:
- 8.255872
Organism(s) associated with this gene
Reaction(s) associated
- XYLULOKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- DARABITOLUTIL-PWY
- 1 reactions found over 2 reactions in the full pathway
- LARABITOLUTIL-PWY
- 1 reactions found over 2 reactions in the full pathway
- XYLCAT-PWY
- 1 reactions found over 2 reactions in the full pathway
