Difference between revisions of "SJ12221"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ13032 == * transcription-direction: ** negative * right-end-position: ** 62086 * left-end-position: ** 54223 * centisome-position: ** 15.623749...")
(Created page with "Category:gene == Gene SJ10070 == * transcription-direction: ** positive * right-end-position: ** 264697 * left-end-position: ** 246220 * centisome-position: ** 61.807484...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ13032 ==
+
== Gene SJ10070 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 62086
+
** 264697
 
* left-end-position:
 
* left-end-position:
** 54223
+
** 246220
 
* centisome-position:
 
* centisome-position:
** 15.623749    
+
** 61.807484    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[ATPASE-RXN]]
+
* [[RXN-12727]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-12195]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=positive}}
* [[RXN-12196]]
+
{{#set: right-end-position=264697}}
** Category: [[annotation]]
+
{{#set: left-end-position=246220}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=61.807484   }}
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-7210]]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7198]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=62086}}
 
{{#set: left-end-position=54223}}
 
{{#set: centisome-position=15.623749   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=4}}
 

Revision as of 15:20, 5 January 2021

Gene SJ10070

  • transcription-direction:
    • positive
  • right-end-position:
    • 264697
  • left-end-position:
    • 246220
  • centisome-position:
    • 61.807484

Organism(s) associated with this gene

Reaction(s) associated