Difference between revisions of "SJ12227"
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(Created page with "Category:gene == Gene SJ17631 == * transcription-direction: ** negative * right-end-position: ** 684953 * left-end-position: ** 661712 * centisome-position: ** 57.520866...") |
(Created page with "Category:gene == Gene SJ12227 == * transcription-direction: ** negative * right-end-position: ** 733112 * left-end-position: ** 730025 * centisome-position: ** 95.44083...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ12227 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 733112 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 730025 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 95.44083 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[CYSTEINE--TRNA-LIGASE-RXN]] | |
| − | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[RXN1G-121]] |
| − | + | ** Category: [[orthology]] | |
| − | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | ** Category: [[ | ||
| − | *** source: [[ | ||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[TRNA-CHARGING-PWY]] |
| − | + | ** '''21''' reactions found over '''21''' reactions in the full pathway | |
| − | + | * [[PWY1G-0]] | |
| − | + | ** '''3''' reactions found over '''6''' reactions in the full pathway | |
| − | |||
| − | ** ''' | ||
| − | * [[ | ||
| − | ** ''' | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=733112}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=730025}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=95.44083 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
Latest revision as of 11:08, 18 March 2021
Contents
Gene SJ12227
- transcription-direction:
- negative
- right-end-position:
- 733112
- left-end-position:
- 730025
- centisome-position:
- 95.44083
Organism(s) associated with this gene
Reaction(s) associated
- CYSTEINE--TRNA-LIGASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN1G-121
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
- PWY1G-0
- 3 reactions found over 6 reactions in the full pathway
