Difference between revisions of "SJ12232"
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(Created page with "Category:gene == Gene SJ11567 == * transcription-direction: ** negative * right-end-position: ** 347056 * left-end-position: ** 326353 * centisome-position: ** 88.081154...") |
(Created page with "Category:gene == Gene SJ12232 == * transcription-direction: ** positive * right-end-position: ** 121703 * left-end-position: ** 100518 * centisome-position: ** 13.141360...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ12232 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 121703 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 100518 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 13.141360 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[RXN1F-20]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-5531]] |
| − | ** ''' | + | ** '''4''' reactions found over '''9''' reactions in the full pathway |
| − | * [[ | + | * [[CHLOROPHYLL-SYN]] |
| − | ** '''6 | + | ** '''6''' reactions found over '''9''' reactions in the full pathway |
| − | + | * [[PWY-7159]] | |
| − | + | ** '''5''' reactions found over '''9''' reactions in the full pathway | |
| − | * [[PWY- | + | {{#set: transcription-direction=positive}} |
| − | ** ''' | + | {{#set: right-end-position=121703}} |
| − | {{#set: transcription-direction= | + | {{#set: left-end-position=100518}} |
| − | {{#set: right-end-position= | + | {{#set: centisome-position=13.141360 }} |
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Latest revision as of 11:10, 18 March 2021
Contents
Gene SJ12232
- transcription-direction:
- positive
- right-end-position:
- 121703
- left-end-position:
- 100518
- centisome-position:
- 13.141360
Organism(s) associated with this gene
Reaction(s) associated
- RXN1F-20
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5531
- 4 reactions found over 9 reactions in the full pathway
- CHLOROPHYLL-SYN
- 6 reactions found over 9 reactions in the full pathway
- PWY-7159
- 5 reactions found over 9 reactions in the full pathway
