Difference between revisions of "SJ12253"

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(Created page with "Category:gene == Gene SJ17989 == * transcription-direction: ** negative * right-end-position: ** 2558 * left-end-position: ** 410 * centisome-position: ** 12.37549 ==...")
(Created page with "Category:gene == Gene SJ12574 == * transcription-direction: ** positive * right-end-position: ** 114440 * left-end-position: ** 102698 * centisome-position: ** 28.711775...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17989 ==
+
== Gene SJ12574 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 2558
+
** 114440
 
* left-end-position:
 
* left-end-position:
−
** 410
+
** 102698
 
* centisome-position:
 
* centisome-position:
−
** 12.37549    
+
** 28.711775    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[13-BETA-GLUCAN-SYNTHASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ALCOHOL-DEHYDROGENASE-NADP+-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PHENOL-BETA-GLUCOSYLTRANSFERASE-RXN]]
+
* [[ALCOHOL-DEHYDROGENASE-NADPORNOP+-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RETINOL-DEHYDROGENASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RIBITOL-2-DEHYDROGENASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-10717]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10841]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12484]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12581]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14023]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6773]]
+
* [[RIBITOLUTIL-PWY]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-6307]]
−
{{#set: right-end-position=2558}}
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
{{#set: left-end-position=410}}
+
* [[PWY-6857]]
−
{{#set: centisome-position=12.37549   }}
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
* [[PWY-6861]]
−
{{#set: nb reaction associated=2}}
+
** '''1''' reactions found over '''12''' reactions in the full pathway
−
{{#set: nb pathway associated=1}}
+
* [[PWY-6872]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7178]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=114440}}
 +
{{#set: left-end-position=102698}}
 +
{{#set: centisome-position=28.711775   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=9}}
 +
{{#set: nb pathway associated=6}}

Revision as of 20:26, 18 December 2020

Gene SJ12574

  • transcription-direction:
    • positive
  • right-end-position:
    • 114440
  • left-end-position:
    • 102698
  • centisome-position:
    • 28.711775

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • RIBITOLUTIL-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6307
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6861
    • 1 reactions found over 12 reactions in the full pathway
  • PWY-6872
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7178
    • 1 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12253&oldid=43878"