Difference between revisions of "SJ12255"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12253 CPD-12253] == * common-name: ** (r)-2-hydroxybutanoate * smiles: ** ccc(o)c(=o)[o-] *...")
(Created page with "Category:gene == Gene SJ12255 == * transcription-direction: ** negative * right-end-position: ** 85853 * left-end-position: ** 75473 * centisome-position: ** 20.95727...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12253 CPD-12253] ==
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== Gene SJ12255 ==
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* common-name:
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* transcription-direction:
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** (r)-2-hydroxybutanoate
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** negative
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* smiles:
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* right-end-position:
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** ccc(o)c(=o)[o-]
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** 85853
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* inchi-key:
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* left-end-position:
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** afendnxgafykqo-gsvougtgsa-m
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** 75473
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* molecular-weight:
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* centisome-position:
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** 103.097
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** 20.95727   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-13719]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-13719]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) of unknown directionality ==
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* [[3.1.1.64-RXN]]
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{{#set: common-name=(r)-2-hydroxybutanoate}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=afendnxgafykqo-gsvougtgsa-m}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=103.097}}
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* [[ARYLESTERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[CARBOXYLESTERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10711]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10767]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12252]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12575]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXNQT-4366]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[STRICTOSIDINE-SYNTHASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6303]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6857]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5290]]
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** '''2''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-6326]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=85853}}
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{{#set: left-end-position=75473}}
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{{#set: centisome-position=20.95727    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=10}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ12255

  • transcription-direction:
    • negative
  • right-end-position:
    • 85853
  • left-end-position:
    • 75473
  • centisome-position:
    • 20.95727

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5290
    • 2 reactions found over 17 reactions in the full pathway
  • PWY-6326
    • 2 reactions found over 5 reactions in the full pathway




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