Difference between revisions of "SJ12257"

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(Created page with "Category:gene == Gene SJ15668 == * transcription-direction: ** negative * right-end-position: ** 259410 * left-end-position: ** 196865 * centisome-position: ** 67.219246...")
(Created page with "Category:gene == Gene SJ14230 == * transcription-direction: ** positive * right-end-position: ** 199568 * left-end-position: ** 174081 * centisome-position: ** 53.818733...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15668 ==
+
== Gene SJ14230 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 259410
+
** 199568
 
* left-end-position:
 
* left-end-position:
−
** 196865
+
** 174081
 
* centisome-position:
 
* centisome-position:
−
** 67.219246    
+
** 53.818733    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.7.1.68-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11135]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6352]]
+
* [[PWY-6147]]
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6351]]
+
* [[PWY-7539]]
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
** '''4''' reactions found over '''5''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-6797]]
−
{{#set: right-end-position=259410}}
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
{{#set: left-end-position=196865}}
+
* [[PWY-7210]]
−
{{#set: centisome-position=67.219246   }}
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY-7198]]
−
{{#set: nb reaction associated=1}}
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: nb pathway associated=2}}
+
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=199568}}
 +
{{#set: left-end-position=174081}}
 +
{{#set: centisome-position=53.818733   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=8}}
 +
{{#set: nb pathway associated=7}}

Revision as of 14:44, 5 January 2021

Gene SJ14230

  • transcription-direction:
    • positive
  • right-end-position:
    • 199568
  • left-end-position:
    • 174081
  • centisome-position:
    • 53.818733

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6147
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7539
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6797
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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