Difference between revisions of "SJ12311"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-2108 CPD0-2108] == * common-name: ** (2e)-oct-2-enoyl-coa * smiles: ** cccccc=cc(=o)sccnc(...")
(Created page with "Category:gene == Gene SJ17329 == * transcription-direction: ** positive * right-end-position: ** 130562 * left-end-position: ** 116944 * centisome-position: ** 44.28087...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-2108 CPD0-2108] ==
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== Gene SJ17329 ==
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* common-name:
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* transcription-direction:
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** (2e)-oct-2-enoyl-coa
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** positive
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* smiles:
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* right-end-position:
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** cccccc=cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
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** 130562
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* inchi-key:
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* left-end-position:
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** cpsdnaxxkwvyiy-ntlmcjqisa-j
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** 116944
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* molecular-weight:
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* centisome-position:
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** 887.685
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** 44.28087   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-14229]]
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* [[S.japonica_sterols_curated]]
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* [[RXN-14276]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[DIOHBUTANONEPSYN-RXN]]
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* [[ACOA80OR]]
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** Category: [[annotation]]
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* [[RXN-12669]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14229]]
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* [[GTP-CYCLOHYDRO-II-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(2e)-oct-2-enoyl-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=cpsdnaxxkwvyiy-ntlmcjqisa-j}}
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== Pathway(s) associated ==
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{{#set: molecular-weight=887.685}}
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* [[RIBOSYN2-PWY]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6167]]
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** '''5''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6168]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7539]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=130562}}
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{{#set: left-end-position=116944}}
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{{#set: centisome-position=44.28087    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=4}}

Revision as of 20:19, 18 December 2020

Gene SJ17329

  • transcription-direction:
    • positive
  • right-end-position:
    • 130562
  • left-end-position:
    • 116944
  • centisome-position:
    • 44.28087

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6167
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-6168
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7539
    • 4 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12311&oldid=40506"