Difference between revisions of "SJ12313"

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(Created page with "Category:gene == Gene SJ09403 == * transcription-direction: ** negative * right-end-position: ** 250836 * left-end-position: ** 240843 * centisome-position: ** 57.689297...")
 
(Created page with "Category:gene == Gene SJ12313 == * transcription-direction: ** positive * right-end-position: ** 83072 * left-end-position: ** 78437 * centisome-position: ** 21.783579...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09403 ==
+
== Gene SJ12313 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 250836
+
** 83072
 
* left-end-position:
 
* left-end-position:
−
** 240843
+
** 78437
 
* centisome-position:
 
* centisome-position:
−
** 57.689297    
+
** 21.783579    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEROXID-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[DIMETHUROPORDEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14240]]
+
* [[RXN-13403]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15288]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8675]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17352]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[UROPORIIIMETHYLTRANSA-RXN]]
−
* [[RXN-8635]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
* [[PWY-7377]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''15''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[PWY-5196]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[PWY-5194]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6824]]
+
* [[PWY-7376]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-5469]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=83072}}
−
* [[PWY-5461]]
+
{{#set: left-end-position=78437}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: centisome-position=21.783579   }}
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=250836}}
 
−
{{#set: left-end-position=240843}}
 
−
{{#set: centisome-position=57.689297   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:10, 18 March 2021

Gene SJ12313

  • transcription-direction:
    • positive
  • right-end-position:
    • 83072
  • left-end-position:
    • 78437
  • centisome-position:
    • 21.783579

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7377
    • 4 reactions found over 15 reactions in the full pathway
  • PWY-5196
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5194
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7376
    • 2 reactions found over 13 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12313&oldid=136380"