Difference between revisions of "SJ12327"

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(Created page with "Category:gene == Gene SJ10813 == * transcription-direction: ** positive * right-end-position: ** 154233 * left-end-position: ** 147239 * centisome-position: ** 38.41201...")
 
(Created page with "Category:gene == Gene SJ16326 == * transcription-direction: ** positive * right-end-position: ** 145990 * left-end-position: ** 138347 * centisome-position: ** 48.526634...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10813 ==
+
== Gene SJ16326 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 154233
+
** 145990
 
* left-end-position:
 
* left-end-position:
−
** 147239
+
** 138347
 
* centisome-position:
 
* centisome-position:
−
** 38.41201    
+
** 48.526634    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLUTAMATE-SYNTHASE-NADH-RXN]]
+
* [[2.7.11.24-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GLUTAMATESYN-RXN]]
+
* [[PROTEIN-KINASE-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[GLUTAMIN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[GLUTDEHYD-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8443]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5381]]
−
* [[PWY-6963]]
+
** '''6''' reactions found over '''11''' reactions in the full pathway
−
** '''4''' reactions found over '''2''' reactions in the full pathway
 
−
* [[GLUGLNSYN-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[GLUTSYN-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[GLUTAMINEFUM-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLUTAMINDEG-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[GLUTSYNIII-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5675]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY490-3]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5913]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=154233}}
+
{{#set: right-end-position=145990}}
−
{{#set: left-end-position=147239}}
+
{{#set: left-end-position=138347}}
−
{{#set: centisome-position=38.41201   }}
+
{{#set: centisome-position=48.526634   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=1}}

Revision as of 14:20, 26 August 2019

Gene SJ16326

  • transcription-direction:
    • positive
  • right-end-position:
    • 145990
  • left-end-position:
    • 138347
  • centisome-position:
    • 48.526634

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12327&oldid=16354"