Difference between revisions of "SJ12357"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17401 CPD-17401] == * common-name: ** 3-oxo-auricoloyl-coa * smiles: ** ccc=cccc(o)cc=ccccc...")
(Created page with "Category:gene == Gene SJ12357 == * transcription-direction: ** positive * right-end-position: ** 324200 * left-end-position: ** 311576 * centisome-position: ** 86.586174...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17401 CPD-17401] ==
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== Gene SJ12357 ==
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* common-name:
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* transcription-direction:
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** 3-oxo-auricoloyl-coa
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** positive
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* smiles:
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* right-end-position:
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** ccc=cccc(o)cc=ccccccccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 324200
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* inchi-key:
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* left-end-position:
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** fgcwebktqlbclr-jrszcninsa-j
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** 311576
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* molecular-weight:
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* centisome-position:
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** 1083.973
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** 86.586174   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-16154]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-16153]]
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* [[RXN-11361]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=3-oxo-auricoloyl-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=fgcwebktqlbclr-jrszcninsa-j}}
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* [[RXN-12473]]
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{{#set: molecular-weight=1083.973}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-6359]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[THIOSULFATE-SULFURTRANSFERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6823]]
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** '''7''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5350]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=324200}}
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{{#set: left-end-position=311576}}
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{{#set: centisome-position=86.586174    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=2}}

Latest revision as of 11:02, 18 March 2021

Gene SJ12357

  • transcription-direction:
    • positive
  • right-end-position:
    • 324200
  • left-end-position:
    • 311576
  • centisome-position:
    • 86.586174

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6823
    • 7 reactions found over 6 reactions in the full pathway
  • PWY-5350
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12357&oldid=132582"