Difference between revisions of "SJ12374"

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(Created page with "Category:gene == Gene SJ10661 == * transcription-direction: ** positive * right-end-position: ** 110818 * left-end-position: ** 96057 * centisome-position: ** 12.188396...")
(Created page with "Category:gene == Gene SJ12374 == * transcription-direction: ** negative * right-end-position: ** 317419 * left-end-position: ** 312600 * centisome-position: ** 86.97757...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10661 ==
+
== Gene SJ12374 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 110818
+
** 317419
 
* left-end-position:
 
* left-end-position:
−
** 96057
+
** 312600
 
* centisome-position:
 
* centisome-position:
−
** 12.188396    
+
** 86.97757    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PEROXID-RXN]]
−
* [[1.8.1.4-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PYRNUTRANSHYDROGEN-RXN]]
+
* [[RXN-14240]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-15288]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7716]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7719]]
+
* [[RXN-17352]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8629]]
+
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-1132]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5083]]
+
* [[PWY-7214]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5084]]
+
* [[PWY-7445]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5046]]
+
* [[PWY-5466]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[GLYCLEAV-PWY]]
+
* [[PWY-6824]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PYRUVDEHYD-PWY]]
+
* [[PWY-5469]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-5461]]
−
{{#set: right-end-position=110818}}
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
{{#set: left-end-position=96057}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=12.188396   }}
+
{{#set: right-end-position=317419}}
 +
{{#set: left-end-position=312600}}
 +
{{#set: centisome-position=86.97757   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:04, 18 March 2021

Gene SJ12374

  • transcription-direction:
    • negative
  • right-end-position:
    • 317419
  • left-end-position:
    • 312600
  • centisome-position:
    • 86.97757

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12374&oldid=133266"