Difference between revisions of "SJ12405"

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(Created page with "Category:gene == Gene SJ02376 == * transcription-direction: ** negative * right-end-position: ** 20964 * left-end-position: ** 6084 * centisome-position: ** 4.462112 =...")
(Created page with "Category:gene == Gene SJ21485 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * DIHYDRONEOPTERIN-MONO-P-...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ02376 ==
+
== Gene SJ21485 ==
* transcription-direction:
 
** negative
 
* right-end-position:
 
** 20964
 
* left-end-position:
 
** 6084
 
* centisome-position:
 
** 4.462112   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[ATPASE-RXN]]
+
* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
* [[RXN-12195]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12196]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7210]]
+
* [[PWY-7539]]
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
* [[PWY-7198]]
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* [[PWY-6797]]
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
* [[PWY-7184]]
+
* [[PWY-6147]]
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=20964}}
 
{{#set: left-end-position=6084}}
 
{{#set: centisome-position=4.462112    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=3}}

Revision as of 08:20, 15 March 2021

Gene SJ21485

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7539
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6797
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6147
    • 5 reactions found over 5 reactions in the full pathway