Difference between revisions of "SJ12405"
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(Created page with "Category:gene == Gene SJ13294 == * transcription-direction: ** negative * right-end-position: ** 340567 * left-end-position: ** 334922 * centisome-position: ** 97.637215...") |
(Created page with "Category:gene == Gene SJ12405 == * transcription-direction: ** negative * right-end-position: ** 215448 * left-end-position: ** 205069 * centisome-position: ** 57.246822...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ12405 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 215448 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 205069 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 57.246822 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ARGDECARBOX-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[GLUTDECARBOX-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| + | * [[PWY-6305]] | ||
| + | ** '''4''' reactions found over '''n.a''' reactions in the full pathway | ||
| + | * [[PWY0-1299]] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[PWY-40]] | ||
** '''2''' reactions found over '''2''' reactions in the full pathway | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-6834]] | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[ARGDEG-III-PWY]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY0-823]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-43]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY0-1305]] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[GLUDEG-I-PWY]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-4321]] | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
| + | </div> | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=215448}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=205069}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=57.246822 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=10}} |
Latest revision as of 11:08, 18 March 2021
Contents
Gene SJ12405
- transcription-direction:
- negative
- right-end-position:
- 215448
- left-end-position:
- 205069
- centisome-position:
- 57.246822
Organism(s) associated with this gene
Reaction(s) associated
- ARGDECARBOX-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GLUTDECARBOX-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-6305
- 4 reactions found over n.a reactions in the full pathway
- PWY0-1299
- 1 reactions found over 1 reactions in the full pathway
- PWY-40
- 2 reactions found over 2 reactions in the full pathway
- PWY-6834
- 2 reactions found over 4 reactions in the full pathway
- ARGDEG-III-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY0-823
- 2 reactions found over 2 reactions in the full pathway
- PWY-43
- 3 reactions found over 3 reactions in the full pathway
- PWY0-1305
- 1 reactions found over 1 reactions in the full pathway
- GLUDEG-I-PWY
- 4 reactions found over 4 reactions in the full pathway
- PWY-4321
- 3 reactions found over 5 reactions in the full pathway
