Difference between revisions of "SJ12405"
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(Created page with "Category:gene == Gene SJ07587 == * transcription-direction: ** negative * right-end-position: ** 37438 * left-end-position: ** 26288 * centisome-position: ** 40.525375...") |
(Created page with "Category:gene == Gene SJ07891 == * transcription-direction: ** negative * right-end-position: ** 34344 * left-end-position: ** 29673 * centisome-position: ** 48.846855...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ07891 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 34344 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 29673 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 48.846855 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[S-ADENMETSYN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| − | *** source: [[ | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | |||
| − | |||
| − | |||
| − | |||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY | + | * [[ETHYL-PWY]] |
| − | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | * [[ | + | * [[METHIONINE-DEG1-PWY]] |
| − | |||
| − | |||
** '''2''' reactions found over '''3''' reactions in the full pathway | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| − | * [[ | + | * [[SAM-PWY]] |
| − | + | ** '''1''' reactions found over '''1''' reactions in the full pathway | |
| − | + | * [[PWY-5912]] | |
| − | ** ''' | + | ** '''1''' reactions found over '''4''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-5041]] |
| − | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| − | * [[PWY- | ||
| − | ** ''' | ||
| − | |||
| − | |||
| − | |||
| − | |||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=34344}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=29673}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=48.846855 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
Revision as of 13:04, 14 January 2021
Contents
Gene SJ07891
- transcription-direction:
- negative
- right-end-position:
- 34344
- left-end-position:
- 29673
- centisome-position:
- 48.846855
Organism(s) associated with this gene
Reaction(s) associated
- S-ADENMETSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- ETHYL-PWY
- 3 reactions found over 3 reactions in the full pathway
- METHIONINE-DEG1-PWY
- 2 reactions found over 3 reactions in the full pathway
- SAM-PWY
- 1 reactions found over 1 reactions in the full pathway
- PWY-5912
- 1 reactions found over 4 reactions in the full pathway
- PWY-5041
- 3 reactions found over 4 reactions in the full pathway
