Difference between revisions of "SJ12412"
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(Created page with "Category:gene == Gene SJ21474 == * transcription-direction: ** negative * right-end-position: ** 174516 * left-end-position: ** 169082 * centisome-position: ** 88.11356...") |
(Created page with "Category:gene == Gene SJ18572 == * transcription-direction: ** positive * right-end-position: ** 181083 * left-end-position: ** 153629 * centisome-position: ** 23.780033...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ18572 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 181083 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 153629 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 23.780033 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[GLYCEROL-3-PHOSPHATE-OXIDASE-RXN]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-15740]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-15745]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN0-5260]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[PWY0-1581]] |
| − | ** '''2''' reactions found over ''' | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY0-1591]] |
| − | {{#set: right-end-position= | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY0-1582]] |
| − | {{#set: centisome-position= | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
| + | * [[PWY-4261]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-6118]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-6952]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY0-1584]] | ||
| + | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY0-1561]] | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=181083}} | ||
| + | {{#set: left-end-position=153629}} | ||
| + | {{#set: centisome-position=23.780033 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=8}} |
Revision as of 11:02, 15 January 2021
Contents
Gene SJ18572
- transcription-direction:
- positive
- right-end-position:
- 181083
- left-end-position:
- 153629
- centisome-position:
- 23.780033
Organism(s) associated with this gene
Reaction(s) associated
- GLYCEROL-3-PHOSPHATE-OXIDASE-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- RXN-15740
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-15745
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN0-5260
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY0-1581
- 1 reactions found over 2 reactions in the full pathway
- PWY0-1591
- 1 reactions found over 2 reactions in the full pathway
- PWY0-1582
- 1 reactions found over 2 reactions in the full pathway
- PWY-4261
- 2 reactions found over 2 reactions in the full pathway
- PWY-6118
- 2 reactions found over 2 reactions in the full pathway
- PWY-6952
- 2 reactions found over 2 reactions in the full pathway
- PWY0-1584
- 1 reactions found over 3 reactions in the full pathway
- PWY0-1561
- 1 reactions found over 2 reactions in the full pathway
