Difference between revisions of "SJ12412"

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(Created page with "Category:gene == Gene SJ18572 == * transcription-direction: ** positive * right-end-position: ** 181083 * left-end-position: ** 153629 * centisome-position: ** 23.780033...")
(Created page with "Category:gene == Gene SJ03311 == * transcription-direction: ** negative * right-end-position: ** 303625 * left-end-position: ** 285937 * centisome-position: ** 54.336166...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18572 ==
+
== Gene SJ03311 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 181083
+
** 303625
 
* left-end-position:
 
* left-end-position:
−
** 153629
+
** 285937
 
* centisome-position:
 
* centisome-position:
−
** 23.780033    
+
** 54.336166    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLYCEROL-3-PHOSPHATE-OXIDASE-RXN]]
+
* [[1.1.3.37-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15740]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[L-GULONOLACTONE-OXIDASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15745]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-13689]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5260]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY0-1581]]
+
* [[PWY3O-6]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY0-1591]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY0-1582]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-4261]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6118]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6952]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY0-1584]]
 
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY0-1561]]
+
* [[PWY3DJ-35471]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-6387]]
−
{{#set: right-end-position=181083}}
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
{{#set: left-end-position=153629}}
+
* [[PWY0-1261]]
−
{{#set: centisome-position=23.780033   }}
+
** '''3''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7953]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6386]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=303625}}
 +
{{#set: left-end-position=285937}}
 +
{{#set: centisome-position=54.336166   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=4}}
 
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=6}}

Revision as of 08:14, 15 March 2021

Gene SJ03311

  • transcription-direction:
    • negative
  • right-end-position:
    • 303625
  • left-end-position:
    • 285937
  • centisome-position:
    • 54.336166

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY3O-6
    • 1 reactions found over 3 reactions in the full pathway
  • PWY3DJ-35471
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6387
    • 2 reactions found over 8 reactions in the full pathway
  • PWY0-1261
    • 3 reactions found over 12 reactions in the full pathway
  • PWY-7953
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6386
    • 2 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12412&oldid=119038"