Difference between revisions of "SJ12412"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5169 CPD-5169] == * common-name: ** α-d-glc-(1→3)-α-d-man-(1→2)-&alph...")
(Created page with "Category:gene == Gene SJ18572 == * transcription-direction: ** positive * right-end-position: ** 181083 * left-end-position: ** 153629 * centisome-position: ** 23.780033...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5169 CPD-5169] ==
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== Gene SJ18572 ==
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* common-name:
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* transcription-direction:
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** α-d-glc-(1→3)-α-d-man-(1→2)-α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→2)-α-d-man-(1→6)]-α-d-man-(1→6)]-β-d-man-(1→4)-β-d-glcnac-(1→4)-α-d-glcnac-diphosphodolichol
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** positive
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== Reaction(s) known to consume the compound ==
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* right-end-position:
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* [[RXN-5471]]
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** 181083
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== Reaction(s) known to produce the compound ==
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* left-end-position:
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* [[RXN-5470]]
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** 153629
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== Reaction(s) of unknown directionality ==
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* centisome-position:
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{{#set: common-name=α-d-glc-(1→3)-α-d-man-(1→2)-α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→2)-α-d-man-(1→6)]-α-d-man-(1→6)]-β-d-man-(1→4)-β-d-glcnac-(1→4)-α-d-glcnac-diphosphodolichol}}
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** 23.780033   
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== Organism(s) associated with this gene  ==
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* [[S.japonica_sterols_curated]]
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== Reaction(s) associated ==
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* [[GLYCEROL-3-PHOSPHATE-OXIDASE-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-15740]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-15745]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN0-5260]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY0-1581]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY0-1591]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY0-1582]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-4261]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6118]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6952]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY0-1584]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY0-1561]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=181083}}
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{{#set: left-end-position=153629}}
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{{#set: centisome-position=23.780033    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=8}}

Revision as of 20:20, 18 December 2020

Gene SJ18572

  • transcription-direction:
    • positive
  • right-end-position:
    • 181083
  • left-end-position:
    • 153629
  • centisome-position:
    • 23.780033

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1581
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1591
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1582
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-4261
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6118
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6952
    • 2 reactions found over 2 reactions in the full pathway
  • PWY0-1584
    • 1 reactions found over 3 reactions in the full pathway
  • PWY0-1561
    • 1 reactions found over 2 reactions in the full pathway




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