Difference between revisions of "SJ12431"

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(Created page with "Category:gene == Gene SJ12567 == * transcription-direction: ** positive * right-end-position: ** 305312 * left-end-position: ** 275849 * centisome-position: ** 77.12044...")
(Created page with "Category:gene == Gene SJ12431 == * transcription-direction: ** negative * right-end-position: ** 323433 * left-end-position: ** 304855 * centisome-position: ** 85.16407...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12567 ==
+
== Gene SJ12431 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 305312
+
** 323433
 
* left-end-position:
 
* left-end-position:
−
** 275849
+
** 304855
 
* centisome-position:
 
* centisome-position:
−
** 77.12044    
+
** 85.16407    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-5286]]
−
* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[LIPOXYGENASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-1321]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13395]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8497]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN1F-72]]
−
* [[RXN-8647]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY66-375]]
+
* [[PWY-5086]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5410]]
+
* [[PWY-7760]]
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''30''' reactions in the full pathway
−
* [[PWY-5409]]
+
* [[PWY-7758]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-735]]
+
* [[PWY-7759]]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''1''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY66-392]]
+
* [[PWY-5064]]
−
** '''1''' reactions found over '''11''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6917]]
+
* [[PWY-5526]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-5406]]
+
{{#set: transcription-direction=negative}}
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=323433}}
−
* [[PWY-5407]]
+
{{#set: left-end-position=304855}}
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=85.16407   }}
−
* [[PWY-5408]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=305312}}
 
−
{{#set: left-end-position=275849}}
 
−
{{#set: centisome-position=77.12044   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:08, 18 March 2021

Gene SJ12431

  • transcription-direction:
    • negative
  • right-end-position:
    • 323433
  • left-end-position:
    • 304855
  • centisome-position:
    • 85.16407

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5086
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7760
    • 1 reactions found over 30 reactions in the full pathway
  • PWY-7758
    • 1 reactions found over 14 reactions in the full pathway
  • PWY-7759
    • 1 reactions found over 18 reactions in the full pathway
  • PWY-5064
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5526
    • 5 reactions found over 13 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12431&oldid=135611"