Difference between revisions of "SJ12453"
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(Created page with "Category:gene == Gene SJ13400 == * transcription-direction: ** positive * right-end-position: ** 98927 * left-end-position: ** 81979 * centisome-position: ** 24.24747...") |
(Created page with "Category:gene == Gene SJ00718 == * transcription-direction: ** negative * right-end-position: ** 340652 * left-end-position: ** 334572 * centisome-position: ** 59.26002...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ00718 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 340652 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 334572 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 59.26002 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[SERINE-O-ACETTRAN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7870]] |
| − | ** ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-7274]] |
| − | {{#set: right-end-position= | + | ** '''1''' reactions found over '''6''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[CYSTSYN-PWY]] |
| − | {{#set: centisome-position= | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| + | * [[PWY-6936]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=340652}} | ||
| + | {{#set: left-end-position=334572}} | ||
| + | {{#set: centisome-position=59.26002 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Revision as of 11:11, 15 January 2021
Contents
Gene SJ00718
- transcription-direction:
- negative
- right-end-position:
- 340652
- left-end-position:
- 334572
- centisome-position:
- 59.26002
Organism(s) associated with this gene
Reaction(s) associated
- SERINE-O-ACETTRAN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7870
- 2 reactions found over 4 reactions in the full pathway
- PWY-7274
- 1 reactions found over 6 reactions in the full pathway
- CYSTSYN-PWY
- 2 reactions found over 2 reactions in the full pathway
- PWY-6936
- 5 reactions found over 5 reactions in the full pathway
