Difference between revisions of "SJ12467"

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(Created page with "Category:gene == Gene SJ10220 == * transcription-direction: ** positive * right-end-position: ** 20464 * left-end-position: ** 3560 * centisome-position: ** 11.196377...")
(Created page with "Category:gene == Gene SJ12467 == * transcription-direction: ** negative * right-end-position: ** 172698 * left-end-position: ** 156857 * centisome-position: ** 20.928778...")
 
(6 intermediate revisions by 2 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10220 ==
+
== Gene SJ12467 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 20464
+
** 172698
 
* left-end-position:
 
* left-end-position:
−
** 3560
+
** 156857
 
* centisome-position:
 
* centisome-position:
−
** 11.196377    
+
** 20.928778    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PHOSACETYLGLUCOSAMINEMUT-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[PHOSPHOGLUCMUT-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16425]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-9140]]
+
* [[RXN-16426]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-16997]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16998]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6164]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-6906]]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[UDPNACETYLGALSYN-PWY]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5514]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6737]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7238]]
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[GLYCOGENSYNTH-PWY]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[GLUCOSE1PMETAB-PWY]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7900]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6731]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5941]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[GLYCOCAT-PWY]]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-622]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6317]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-2723]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3801]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7343]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5818]]
+
* [[PWY-5940]]
−
** '''1''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-7752]]
+
* [[PWY-7902]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-5384]]
−
{{#set: right-end-position=20464}}
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
{{#set: left-end-position=3560}}
+
* [[PWY-5661]]
−
{{#set: centisome-position=11.196377   }}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY66-422]]
−
{{#set: nb reaction associated=2}}
+
** '''5''' reactions found over '''n.a''' reactions in the full pathway
−
{{#set: nb pathway associated=3}}
+
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=172698}}
 +
{{#set: left-end-position=156857}}
 +
{{#set: centisome-position=20.928778   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=21}}

Latest revision as of 11:02, 18 March 2021

Gene SJ12467

  • transcription-direction:
    • negative
  • right-end-position:
    • 172698
  • left-end-position:
    • 156857
  • centisome-position:
    • 20.928778

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6906
    • 1 reactions found over 8 reactions in the full pathway
  • UDPNACETYLGALSYN-PWY
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5514
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6737
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7238
    • 5 reactions found over 8 reactions in the full pathway
  • GLYCOGENSYNTH-PWY
    • 1 reactions found over 4 reactions in the full pathway
  • GLUCOSE1PMETAB-PWY
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6731
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5941
    • 3 reactions found over 6 reactions in the full pathway
  • GLYCOCAT-PWY
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-622
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6317
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-2723
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3801
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7343
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5940
    • 2 reactions found over 18 reactions in the full pathway
  • PWY-7902
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5384
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5661
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-422
    • 5 reactions found over n.a reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12467&oldid=132730"