Difference between revisions of "SJ12530"

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(Created page with "Category:gene == Gene SJ13033 == * transcription-direction: ** positive * right-end-position: ** 76526 * left-end-position: ** 64499 * centisome-position: ** 18.584663...")
(Created page with "Category:gene == Gene SJ20100 == * transcription-direction: ** negative * right-end-position: ** 1537 * left-end-position: ** 119 * centisome-position: ** 7.2649574 ==...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ13033 ==
+
== Gene SJ20100 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 76526
+
** 1537
 
* left-end-position:
 
* left-end-position:
** 64499
+
** 119
 
* centisome-position:
 
* centisome-position:
** 18.584663    
+
** 7.2649574    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[THREONINE--TRNA-LIGASE-RXN]]
* [[ATPASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12195]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12196]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-6797]]
+
* [[TRNA-CHARGING-PWY]]
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
* [[PWY-6147]]
+
{{#set: transcription-direction=negative}}
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: right-end-position=1537}}
* [[PWY-7539]]
+
{{#set: left-end-position=119}}
** '''4''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=7.2649574   }}
* [[PWY-7210]]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7198]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=76526}}
 
{{#set: left-end-position=64499}}
 
{{#set: centisome-position=18.584663   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}

Revision as of 09:27, 27 August 2019

Gene SJ20100

  • transcription-direction:
    • negative
  • right-end-position:
    • 1537
  • left-end-position:
    • 119
  • centisome-position:
    • 7.2649574

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated