Difference between revisions of "SJ12575"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-DOCOSAPENTAENOYL-ACP 3-HYDROXY-DOCOSAPENTAENOYL-ACP] == * common-name: ** a (3r)-3-hy...")
 
(Created page with "Category:gene == Gene SJ12575 == * transcription-direction: ** negative * right-end-position: ** 135143 * left-end-position: ** 125517 * centisome-position: ** 35.091393...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-DOCOSAPENTAENOYL-ACP 3-HYDROXY-DOCOSAPENTAENOYL-ACP] ==
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== Gene SJ12575 ==
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* common-name:
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* transcription-direction:
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** a (3r)-3-hydroxy-docosapentaenoyl-[acp]
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** negative
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== Reaction(s) known to consume the compound ==
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* right-end-position:
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== Reaction(s) known to produce the compound ==
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** 135143
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* [[RXN-13008]]
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* left-end-position:
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== Reaction(s) of unknown directionality ==
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** 125517
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{{#set: common-name=a (3r)-3-hydroxy-docosapentaenoyl-[acp]}}
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* centisome-position:
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** 35.091393   
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== Organism(s) associated with this gene  ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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* [[INDOLE-23-DIOXYGENASE-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-8664]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-8665]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7430]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5651]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6309]]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7765]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7717]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[TRPCAT-PWY]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=135143}}
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{{#set: left-end-position=125517}}
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{{#set: centisome-position=35.091393    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=6}}

Latest revision as of 11:04, 18 March 2021

Gene SJ12575

  • transcription-direction:
    • negative
  • right-end-position:
    • 135143
  • left-end-position:
    • 125517
  • centisome-position:
    • 35.091393

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7430
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5651
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6309
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-7765
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7717
    • 3 reactions found over 6 reactions in the full pathway
  • TRPCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12575&oldid=133284"