Difference between revisions of "SJ12575"

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(Created page with "Category:gene == Gene SJ04559 == * transcription-direction: ** negative * right-end-position: ** 32513 * left-end-position: ** 27070 * centisome-position: ** 25.632042...")
(Created page with "Category:gene == Gene SJ12575 == * transcription-direction: ** negative * right-end-position: ** 135143 * left-end-position: ** 125517 * centisome-position: ** 35.091393...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04559 ==
+
== Gene SJ12575 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 32513
+
** 135143
 
* left-end-position:
 
* left-end-position:
−
** 27070
+
** 125517
 
* centisome-position:
 
* centisome-position:
−
** 25.632042    
+
** 35.091393    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[INDOLE-23-DIOXYGENASE-RXN]]
−
* [[3.2.1.21-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8664]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10769]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8665]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10773]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13602]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13603]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14179]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-5341]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8036]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9674]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6788]]
+
* [[PWY-7430]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7091]]
+
* [[PWY-5651]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7092]]
+
* [[PWY-6309]]
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7765]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7717]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[TRPCAT-PWY]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-3121]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5176]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6002]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=32513}}
+
{{#set: right-end-position=135143}}
−
{{#set: left-end-position=27070}}
+
{{#set: left-end-position=125517}}
−
{{#set: centisome-position=25.632042   }}
+
{{#set: centisome-position=35.091393   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=3}}
 
{{#set: nb pathway associated=6}}
 
{{#set: nb pathway associated=6}}

Latest revision as of 11:04, 18 March 2021

Gene SJ12575

  • transcription-direction:
    • negative
  • right-end-position:
    • 135143
  • left-end-position:
    • 125517
  • centisome-position:
    • 35.091393

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7430
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5651
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6309
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-7765
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7717
    • 3 reactions found over 6 reactions in the full pathway
  • TRPCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12575&oldid=133284"