Difference between revisions of "SJ12580"

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(Created page with "Category:gene == Gene SJ10476 == * transcription-direction: ** negative * right-end-position: ** 165723 * left-end-position: ** 153673 * centisome-position: ** 39.516106...")
 
(Created page with "Category:gene == Gene SJ12580 == * transcription-direction: ** negative * right-end-position: ** 13501 * left-end-position: ** 10966 * centisome-position: ** 69.378716...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10476 ==
+
== Gene SJ12580 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 165723
+
** 13501
 
* left-end-position:
 
* left-end-position:
−
** 153673
+
** 10966
 
* centisome-position:
 
* centisome-position:
−
** 39.516106    
+
** 69.378716    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ATPASE-RXN]]
−
* [[1.1.1.145-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DTDPGLUCDEHYDRAT-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12693]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12747]]
+
* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12789]]
+
* [[RXN-12196]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN66-342]]
+
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN66-350]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-353]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[UDP-GLUCURONATE-DECARBOXYLASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6545]]
−
* [[PWY-6808]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7210]]
−
* [[PWY-7657]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[PWY-7104]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-7184]]
−
* [[PWY-6973]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6974]]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6976]]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6953]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7414]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7315]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7318]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6942]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7440]]
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7814]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-3221]]
 
−
** '''1''' reactions found over '''n.a''' reactions in the full pathway
 
−
* [[PWY-7413]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7312]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7316]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[DTDPRHAMSYN-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7688]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7301]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6946]]
 
−
** '''6''' reactions found over '''22''' reactions in the full pathway
 
−
* [[PWY-6944]]
 
−
** '''2''' reactions found over '''25''' reactions in the full pathway
 
−
* [[PWY-6948]]
 
−
** '''2''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY66-378]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7299]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-4821]]
 
−
** '''2''' reactions found over '''1''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=165723}}
+
{{#set: right-end-position=13501}}
−
{{#set: left-end-position=153673}}
+
{{#set: left-end-position=10966}}
−
{{#set: centisome-position=39.516106   }}
+
{{#set: centisome-position=69.378716   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=26}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:06, 18 March 2021

Gene SJ12580

  • transcription-direction:
    • negative
  • right-end-position:
    • 13501
  • left-end-position:
    • 10966
  • centisome-position:
    • 69.378716

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12580&oldid=134588"