Difference between revisions of "SJ12788"

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(Created page with "Category:gene == Gene SJ16802 == * transcription-direction: ** positive * right-end-position: ** 264271 * left-end-position: ** 248065 * centisome-position: ** 89.65903...")
(Created page with "Category:gene == Gene SJ12788 == * transcription-direction: ** negative * right-end-position: ** 225910 * left-end-position: ** 215958 * centisome-position: ** 61.281372...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16802 ==
+
== Gene SJ12788 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 264271
+
** 225910
 
* left-end-position:
 
* left-end-position:
−
** 248065
+
** 215958
 
* centisome-position:
 
* centisome-position:
−
** 89.65903    
+
** 61.281372    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
** Category: [[orthology]]
−
{{#set: right-end-position=264271}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: left-end-position=248065}}
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
{{#set: centisome-position=89.65903   }}
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=225910}}
 +
{{#set: left-end-position=215958}}
 +
{{#set: centisome-position=61.281372   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:05, 18 March 2021

Gene SJ12788

  • transcription-direction:
    • negative
  • right-end-position:
    • 225910
  • left-end-position:
    • 215958
  • centisome-position:
    • 61.281372

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12788&oldid=134128"