Difference between revisions of "SJ12788"

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(Created page with "Category:gene == Gene SJ07227 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-8025 ** Category:...")
(Created page with "Category:gene == Gene SJ16508 == * transcription-direction: ** positive * right-end-position: ** 213987 * left-end-position: ** 201683 * centisome-position: ** 71.79707...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ07227 ==
+
== Gene SJ16508 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 213987
 +
* left-end-position:
 +
** 201683
 +
* centisome-position:
 +
** 71.79707   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_carotenoid_curated]]
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* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RXN-8025]]
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* [[PROLINE--TRNA-LIGASE-RXN]]
** Category: [[manual]]
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** Category: [[annotation]]
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-8026]]
 
** Category: [[manual]]
 
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
* [[RXN1F-152]]
 
** Category: [[manual]]
 
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7638]]
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* [[TRNA-CHARGING-PWY]]
** '''2''' reactions found over '''4''' reactions in the full pathway
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** '''21''' reactions found over '''21''' reactions in the full pathway
* [[PWY-5944]]
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{{#set: transcription-direction=positive}}
** '''2''' reactions found over '''2''' reactions in the full pathway
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{{#set: right-end-position=213987}}
* [[PWY-5288]]
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{{#set: left-end-position=201683}}
** '''2''' reactions found over '''10''' reactions in the full pathway
+
{{#set: centisome-position=71.79707    }}
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}

Revision as of 20:24, 18 December 2020

Gene SJ16508

  • transcription-direction:
    • positive
  • right-end-position:
    • 213987
  • left-end-position:
    • 201683
  • centisome-position:
    • 71.79707

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated