Difference between revisions of "SJ12861"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4702 CPD-4702] == * common-name: ** 4α-carboxy-5α-cholesta-8,24-dien-3β-ol...")
(Created page with "Category:gene == Gene SJ12861 == * transcription-direction: ** negative * right-end-position: ** 193619 * left-end-position: ** 171356 * centisome-position: ** 48.943195...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4702 CPD-4702] ==
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== Gene SJ12861 ==
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* common-name:
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* transcription-direction:
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** 4α-carboxy-5α-cholesta-8,24-dien-3β-ol
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** negative
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* smiles:
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* right-end-position:
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** cc(c)=cccc(c)[ch]3(cc[ch]4(c2(cc[ch]1(c(c([o-])=o)c(o)ccc(c)1c=2ccc(c)34))))
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** 193619
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* inchi-key:
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* left-end-position:
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** jhiwifrqjxlneu-gsqagghasa-m
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** 171356
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* molecular-weight:
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* centisome-position:
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** 427.646
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** 48.943195   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN66-318]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-13709]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-13709-4-METHYL-824-CHOLESTADIENOL/NADH/OXYGEN-MOLECULE/PROTON//CPD-4702/NAD/WATER.76.]]
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* [[RXN-11056]]
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* [[RXN-13709-4-METHYL-824-CHOLESTADIENOL/NADPH/OXYGEN-MOLECULE/PROTON//CPD-4702/NADP/WATER.78.]]
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** Category: [[orthology]]
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== Reaction(s) of unknown directionality ==
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: common-name=4&alpha;-carboxy-5&alpha;-cholesta-8,24-dien-3&beta;-ol}}
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* [[RXN-11057]]
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{{#set: inchi-key=inchikey=jhiwifrqjxlneu-gsqagghasa-m}}
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** Category: [[orthology]]
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{{#set: molecular-weight=427.646}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-13064]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-15029]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17334]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17335]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17625]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17627]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-8630]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-8872]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN66-146]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN66-161]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN66-163]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN66-169]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN66-181]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-6398]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6992]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7407]]
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** '''2''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5451]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7466]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5665]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7826]]
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** '''2''' reactions found over '''25''' reactions in the full pathway
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* [[PWY66-201]]
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** '''3''' reactions found over '''16''' reactions in the full pathway
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* [[PWY66-221]]
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** '''5''' reactions found over '''18''' reactions in the full pathway
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* [[PWY66-241]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=193619}}
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{{#set: left-end-position=171356}}
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{{#set: centisome-position=48.943195    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=16}}
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{{#set: nb pathway associated=10}}

Latest revision as of 11:01, 18 March 2021

Gene SJ12861

  • transcription-direction:
    • negative
  • right-end-position:
    • 193619
  • left-end-position:
    • 171356
  • centisome-position:
    • 48.943195

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6398
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6992
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7407
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-5451
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7466
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5665
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7826
    • 2 reactions found over 25 reactions in the full pathway
  • PWY66-201
    • 3 reactions found over 16 reactions in the full pathway
  • PWY66-221
    • 5 reactions found over 18 reactions in the full pathway
  • PWY66-241
    • 1 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12861&oldid=131801"