Difference between revisions of "SJ12861"

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(Created page with "Category:gene == Gene SJ07828 == * transcription-direction: ** positive * right-end-position: ** 41740 * left-end-position: ** 37382 * centisome-position: ** 8.338055...")
(Created page with "Category:gene == Gene SJ12861 == * transcription-direction: ** negative * right-end-position: ** 193619 * left-end-position: ** 171356 * centisome-position: ** 48.943195...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07828 ==
+
== Gene SJ12861 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 41740
+
** 193619
 
* left-end-position:
 
* left-end-position:
−
** 37382
+
** 171356
 
* centisome-position:
 
* centisome-position:
−
** 8.338055    
+
** 48.943195    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[RXN-11056]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-11057]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-13064]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15029]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[RXN-17334]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[RXN-17335]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17625]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-17627]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8630]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8872]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN66-146]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN66-161]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN66-163]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN66-169]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN66-181]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-6398]]
−
* [[PWY-7198]]
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-6992]]
−
* [[PWY-7184]]
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7407]]
−
* [[PWY-6545]]
+
** '''2''' reactions found over '''11''' reactions in the full pathway
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-5451]]
−
{{#set: transcription-direction=positive}}
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
{{#set: right-end-position=41740}}
+
* [[PWY-7466]]
−
{{#set: left-end-position=37382}}
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
{{#set: centisome-position=8.338055   }}
+
* [[PWY-5665]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7826]]
 +
** '''2''' reactions found over '''25''' reactions in the full pathway
 +
* [[PWY66-201]]
 +
** '''3''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY66-221]]
 +
** '''5''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY66-241]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=193619}}
 +
{{#set: left-end-position=171356}}
 +
{{#set: centisome-position=48.943195   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=16}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=10}}

Latest revision as of 11:01, 18 March 2021

Gene SJ12861

  • transcription-direction:
    • negative
  • right-end-position:
    • 193619
  • left-end-position:
    • 171356
  • centisome-position:
    • 48.943195

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6398
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6992
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7407
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-5451
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7466
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5665
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7826
    • 2 reactions found over 25 reactions in the full pathway
  • PWY66-201
    • 3 reactions found over 16 reactions in the full pathway
  • PWY66-221
    • 5 reactions found over 18 reactions in the full pathway
  • PWY66-241
    • 1 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12861&oldid=131801"