Difference between revisions of "SJ12876"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14271 CPD-14271] == * common-name: ** 3-oxoicosanoyl-coa * smiles: ** cccccccccccccccccc(=o...")
 
(Created page with "Category:gene == Gene SJ12876 == * transcription-direction: ** positive * right-end-position: ** 82820 * left-end-position: ** 82344 * centisome-position: ** 23.519331...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14271 CPD-14271] ==
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== Gene SJ12876 ==
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* common-name:
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* transcription-direction:
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** 3-oxoicosanoyl-coa
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** positive
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* smiles:
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* right-end-position:
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** cccccccccccccccccc(=o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
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** 82820
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* inchi-key:
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* left-end-position:
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** fybvhnzjdvuvlj-ibyujnrcsa-j
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** 82344
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* molecular-weight:
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* centisome-position:
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** 1072.006
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** 23.519331   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-13298]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-13294]]
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* [[GSHTRAN-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=3-oxoicosanoyl-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=fybvhnzjdvuvlj-ibyujnrcsa-j}}
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* [[GST-RXN]]
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{{#set: molecular-weight=1072.006}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13673]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15680]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6842]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4061]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7112]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7533]]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=82820}}
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{{#set: left-end-position=82344}}
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{{#set: centisome-position=23.519331    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:04, 18 March 2021

Gene SJ12876

  • transcription-direction:
    • positive
  • right-end-position:
    • 82820
  • left-end-position:
    • 82344
  • centisome-position:
    • 23.519331

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12876&oldid=133591"