Difference between revisions of "SJ12898"

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(Created page with "Category:gene == Gene SJ09892 == * transcription-direction: ** negative * right-end-position: ** 88797 * left-end-position: ** 75550 * centisome-position: ** 18.678534...")
(Created page with "Category:gene == Gene SJ18183 == * transcription-direction: ** negative * right-end-position: ** 119252 * left-end-position: ** 115282 * centisome-position: ** 45.860386...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09892 ==
+
== Gene SJ18183 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 88797
+
** 119252
 
* left-end-position:
 
* left-end-position:
−
** 75550
+
** 115282
 
* centisome-position:
 
* centisome-position:
−
** 18.678534    
+
** 45.860386    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[OHMETPYRKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[PYRIMSYN3-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12610]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[RXN-12611]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[THI-P-SYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-6910]]
−
* [[PWY-7198]]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7357]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7356]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-6890]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-7282]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6907]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6893]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6894]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6908]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6897]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=88797}}
+
{{#set: right-end-position=119252}}
−
{{#set: left-end-position=75550}}
+
{{#set: left-end-position=115282}}
−
{{#set: centisome-position=18.678534   }}
+
{{#set: centisome-position=45.860386   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=10}}

Revision as of 11:12, 15 January 2021

Gene SJ18183

  • transcription-direction:
    • negative
  • right-end-position:
    • 119252
  • left-end-position:
    • 115282
  • centisome-position:
    • 45.860386

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6910
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7357
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7356
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6890
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7282
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-6907
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6893
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6894
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6908
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6897
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12898&oldid=110422"