Difference between revisions of "SJ12898"

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(Created page with "Category:gene == Gene SJ18183 == * transcription-direction: ** negative * right-end-position: ** 119252 * left-end-position: ** 115282 * centisome-position: ** 45.860386...")
(Created page with "Category:gene == Gene SJ02309 == * transcription-direction: ** positive * right-end-position: ** 29576 * left-end-position: ** 23154 * centisome-position: ** 16.702976...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18183 ==
+
== Gene SJ02309 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 119252
+
** 29576
 
* left-end-position:
 
* left-end-position:
−
** 115282
+
** 23154
 
* centisome-position:
 
* centisome-position:
−
** 45.860386    
+
** 16.702976    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-8853]]
−
* [[OHMETPYRKIN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PYRIMSYN3-RXN]]
+
* [[SEPIAPTERIN-REDUCTASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12610]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12611]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[THI-P-SYN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5663]]
−
* [[PWY-6910]]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-7357]]
+
{{#set: right-end-position=29576}}
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
{{#set: left-end-position=23154}}
−
* [[PWY-7356]]
+
{{#set: centisome-position=16.702976   }}
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6890]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7282]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6907]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6893]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6894]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6908]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6897]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=119252}}
 
−
{{#set: left-end-position=115282}}
 
−
{{#set: centisome-position=45.860386   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=1}}

Revision as of 08:23, 15 March 2021

Gene SJ02309

  • transcription-direction:
    • positive
  • right-end-position:
    • 29576
  • left-end-position:
    • 23154
  • centisome-position:
    • 16.702976

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5663
    • 3 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12898&oldid=123450"