Difference between revisions of "SJ12898"
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(Created page with "Category:gene == Gene SJ05173 == * transcription-direction: ** negative * right-end-position: ** 61756 * left-end-position: ** 57380 * centisome-position: ** 59.865616...") |
(Created page with "Category:gene == Gene SJ00773 == * transcription-direction: ** negative * right-end-position: ** 158139 * left-end-position: ** 145604 * centisome-position: ** 90.0491...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ00773 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 158139 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 145604 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 90.0491 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[AGMATIN-RXN]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[ARGINASE-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6305]] |
| − | ** '''3''' reactions found over ''' | + | ** '''4''' reactions found over '''n.a''' reactions in the full pathway |
| + | * [[PWY0-823]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-40]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-6922]] | ||
| + | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-4984]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[ARG-GLU-PWY]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[ARG-PRO-PWY]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[ARGASEDEG-PWY]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[CITRULBIO-PWY]] | ||
| + | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=158139}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=145604}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=90.0491 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=9}} |
Revision as of 13:07, 14 January 2021
Contents
Gene SJ00773
- transcription-direction:
- negative
- right-end-position:
- 158139
- left-end-position:
- 145604
- centisome-position:
- 90.0491
Organism(s) associated with this gene
Reaction(s) associated
- AGMATIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- ARGINASE-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-6305
- 4 reactions found over n.a reactions in the full pathway
- PWY0-823
- 2 reactions found over 2 reactions in the full pathway
- PWY-40
- 2 reactions found over 2 reactions in the full pathway
- PWY-6922
- 5 reactions found over 7 reactions in the full pathway
- PWY-4984
- 5 reactions found over 5 reactions in the full pathway
- ARG-GLU-PWY
- 2 reactions found over 2 reactions in the full pathway
- ARG-PRO-PWY
- 3 reactions found over 4 reactions in the full pathway
- ARGASEDEG-PWY
- 3 reactions found over 3 reactions in the full pathway
- CITRULBIO-PWY
- 7 reactions found over 8 reactions in the full pathway
