Difference between revisions of "SJ12918"

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(Created page with "Category:gene == Gene SJ10617 == * transcription-direction: ** positive * right-end-position: ** 270840 * left-end-position: ** 254884 * centisome-position: ** 65.84159...")
(Created page with "Category:gene == Gene SJ12918 == * transcription-direction: ** positive * right-end-position: ** 343346 * left-end-position: ** 340307 * centisome-position: ** 97.49576...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10617 ==
+
== Gene SJ12918 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 270840
+
** 343346
 
* left-end-position:
 
* left-end-position:
−
** 254884
+
** 340307
 
* centisome-position:
 
* centisome-position:
−
** 65.84159    
+
** 97.49576    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2.7.7.1-RXN]]
−
* [[3.1.3.74-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[NICONUCADENYLYLTRAN-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GPH-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[PYAMPP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14181]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7204]]
+
* [[NAD-BIOSYNTHESIS-III]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-181]]
+
* [[PWY3O-4106]]
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7761]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5653]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PYRIDNUCSAL-PWY]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5381]]
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 +
* [[PYRIDNUCSYN-PWY]]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=270840}}
+
{{#set: right-end-position=343346}}
−
{{#set: left-end-position=254884}}
+
{{#set: left-end-position=340307}}
−
{{#set: centisome-position=65.84159   }}
+
{{#set: centisome-position=97.49576   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:03, 18 March 2021

Gene SJ12918

  • transcription-direction:
    • positive
  • right-end-position:
    • 343346
  • left-end-position:
    • 340307
  • centisome-position:
    • 97.49576

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • NAD-BIOSYNTHESIS-III
    • 1 reactions found over 2 reactions in the full pathway
  • PWY3O-4106
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7761
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-5653
    • 3 reactions found over 4 reactions in the full pathway
  • PYRIDNUCSAL-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway
  • PYRIDNUCSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12918&oldid=132800"