Difference between revisions of "SJ12925"
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(Created page with "Category:gene == Gene SJ11349 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == <div class="toccolours mw-co...") |
(Created page with "Category:gene == Gene SJ12925 == * transcription-direction: ** negative * right-end-position: ** 188058 * left-end-position: ** 175706 * centisome-position: ** 50.33864...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ12925 == |
+ | * transcription-direction: | ||
+ | ** negative | ||
+ | * right-end-position: | ||
+ | ** 188058 | ||
+ | * left-end-position: | ||
+ | ** 175706 | ||
+ | * centisome-position: | ||
+ | ** 50.33864 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | * [[ | + | * [[3.6.3.4-RXN]] |
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[ATPASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[Cut1]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** source: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
− | * [[ | + | * [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]] |
− | + | ** Category: [[annotation]] | |
− | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | |
− | + | * [[RXN-12195]] | |
− | + | ** Category: [[annotation]] | |
− | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | |
− | + | * [[RXN-12196]] | |
− | + | ** Category: [[annotation]] | |
− | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | |
− | + | * [[RXN0-5462]] | |
− | ** Category: [[ | + | ** Category: [[annotation]] |
− | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | * [[RXN- | ||
− | ** Category: [[ | ||
− | *** source: [[ | ||
− | * [[RXN- | ||
− | ** Category: [[ | ||
− | *** source: [[ | ||
− | * [[ | ||
− | ** Category: [[ | ||
− | *** source: [[ | ||
</div> | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-6545]] |
− | ** ''' | + | ** '''8''' reactions found over '''9''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-7210]] |
− | ** ''' | + | ** '''8''' reactions found over '''8''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-7198]] |
− | ** ''' | + | ** '''6''' reactions found over '''7''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-7184]] |
− | ** ''' | + | ** '''9''' reactions found over '''9''' reactions in the full pathway |
− | + | {{#set: transcription-direction=negative}} | |
− | + | {{#set: right-end-position=188058}} | |
− | + | {{#set: left-end-position=175706}} | |
− | + | {{#set: centisome-position=50.33864 }} | |
− | |||
− | |||
− | |||
− | |||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=7}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Latest revision as of 11:10, 18 March 2021
Contents
Gene SJ12925
- transcription-direction:
- negative
- right-end-position:
- 188058
- left-end-position:
- 175706
- centisome-position:
- 50.33864
Organism(s) associated with this gene
Reaction(s) associated
- 3.6.3.4-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- ATPASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- Cut1
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- NUCLEOSIDE-TRIPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12195
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12196
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5462
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6545
- 8 reactions found over 9 reactions in the full pathway
- PWY-7210
- 8 reactions found over 8 reactions in the full pathway
- PWY-7198
- 6 reactions found over 7 reactions in the full pathway
- PWY-7184
- 9 reactions found over 9 reactions in the full pathway