Difference between revisions of "SJ12953"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1823 CPD-1823] == * common-name: ** nπ-methyl-l-histidine * smiles: ** cn1(c=nc=c1cc(c(=...")
(Created page with "Category:gene == Gene SJ12953 == * transcription-direction: ** positive * right-end-position: ** 25369 * left-end-position: ** 13172 * centisome-position: ** 3.7793882...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1823 CPD-1823] ==
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== Gene SJ12953 ==
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* common-name:
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* transcription-direction:
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** nπ-methyl-l-histidine
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** positive
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* smiles:
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* right-end-position:
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** cn1(c=nc=c1cc(c(=o)[o-])[n+])
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** 25369
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* inchi-key:
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* left-end-position:
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** jdhildinmrgule-lurjtmiesa-n
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** 13172
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* molecular-weight:
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* centisome-position:
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** 169.183
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** 3.7793882   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[X-METHYL-HIS-DIPEPTIDASE-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[GLUTAMIDOTRANS-RXN]]
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{{#set: common-name=nπ-methyl-l-histidine}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=jdhildinmrgule-lurjtmiesa-n}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=169.183}}
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* [[GLUTAMIN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PRIBFAICARPISOM-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PRICI]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17900]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[HISTSYN-PWY]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[CITRULBIO-PWY]]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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* [[GLUTAMINDEG-PWY]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=25369}}
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{{#set: left-end-position=13172}}
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{{#set: centisome-position=3.7793882    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=3}}

Latest revision as of 11:00, 18 March 2021

Gene SJ12953

  • transcription-direction:
    • positive
  • right-end-position:
    • 25369
  • left-end-position:
    • 13172
  • centisome-position:
    • 3.7793882

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • HISTSYN-PWY
    • 10 reactions found over 10 reactions in the full pathway
  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway
  • GLUTAMINDEG-PWY
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12953&oldid=131758"